Α α:阿尔法 Alpha Β β:贝塔 Beta Γ γ:伽玛bai Gamma Δ δ:德尔塔 Delte Ε ε:艾普西龙 Epsilon Ζ ζ :捷塔 Zeta Ε η:依塔 Eta Θ θ:西塔 Theta Ι ι:艾欧塔 Iota Κ κ:喀帕 Kappa ∧ λ:拉姆达 Lambda Μ μ:缪 Mu Ν ν:拗 Nu Ξ ξ:克西 Xi Ο ο:欧麦克轮 Omicron ∏ π:派 Pi Ρ ρ:柔 Rho ∑ σ:西格玛 Sigma Τ τ:套 Tau Υ υ:宇普西龙 Upsilon Φ φ:fai Phi Χ χ:器 Chi Ψ ψ:普赛 Psi Ω ω:欧米伽 Omega
IUPAC nucleotide code | Base |
A | Adenine |
C | Cytosine |
G | Guanine |
T (or U) | Thymine (or Uracil) |
R | A or G |
Y | C or T |
S | G or C |
W | A or T |
K | G or T |
M | A or C |
B | C or G or T |
D | A or G or T |
H | A or C or T |
V | A or C or G |
N | any base |
. or - | gap |
中文名 | Name | 3-Letter code | 1-Letter code | Side chain | Desc |
---|---|---|---|---|---|
甘氨酸 | Glycine | Gly | G | H | Optically inactive. |
丙氨酸 | Alanine | Ala | A | -CH3 | The simplest optically active AA. All other AAs will build off alanine, A like the beginning of the alphabet. |
缬氨酸 | Valine | Val | V | -CH(CH3)2 | The side chain is branched like a V. |
亮氨酸 | Leucine | Leu | L | -CH2[CH(CH3)2] | The side chain is branched like a Y. |
异亮氨酸 | Isoleucine | Ile | I | -CH(CH3)(C2H5) | An isomer of leucine. One branch is longer than the other. |
脯氨酸 | Proline | Pro | P | -CH2 CH2CH2– | The only cyclic aliphatic. |
半胱氨酸 | Cysteine | Cys | C | -CH2-SH | Cysteine has a sulfhydryl (SH) group. |
甲硫氨酸/蛋氨酸 | Methionine | Met | M | -(CH2)-S-(CH3) | Thiol is synonymous with sulfur. Methionine is a methylated sulfur. |
苯丙氨酸 | Phenylalanine | Phe | F | -CH2(C6H5) | A benzene (or phenyl) ring attached to an alanine. F like its name. |
色氨酸 | Tryptophan | Trp | W | -indole ring | AA with the largest side chain, two fused rings (double). |
酪氨酸 | Tyrosine | Tyr | Y | -CH2(C6H4OH) | A hydroxylated (OH) phenylalanine. |
丝氨酸 | Serine | Ser | S | -CH2OH | A hydroxylated alanine. |
苏氨酸 | Threonine | Thr | T | – CH(OH)(CH3) | Three parts to this AA: alanine, methyl, and hydroxyl. |
精氨酸 | Arginine | Arg | R | -(CH2)3-urea | The side chain has a urea (NH2-C (NH2+)(NH)) group (A pirates favorite AA, arginine). |
赖氨酸 | Lysine | Lys | K | -(CH2)4-NH3+ | The basic straight chain AA with amino group . |
组氨酸 | Histidine | His | H | -CH2-(C3N2H4)+ | This amino acid has an imidazole, an aromatic ring with two nitrogen atoms that can be protonated. |
天冬氨酸 | Aspartate | Asp | D | -CH2COOH | An acidic alanine. Just remember D. |
谷氨酸 | Glutamate | Glu | E | -CH2CH2COOH | A longer version of Asp. E follows D in the alphabet. |
天冬酰胺 | Asparagine | Asn | N | -CH2CONH2 | Amidated Asp. |
谷氨酰胺 | Glutamine | Gln | Q | -CH2CH2CONH2 | AmidatedGlu. |
Amino-acidbiochemical properties | Nonpolar (np) | Polar (p) | Basic (b) | Acidic (a) | Termination: stop codon * | Initiation: possible start codon ⇒ |
1st
base |
2nd base | 3rd
base | |||||||
---|---|---|---|---|---|---|---|---|---|
T | C | A | G | ||||||
T | TTT | (Phe/F) Phenylalanine(np) | TCT | (Ser/S) Serine(p) | TAT | (Tyr/Y) Tyrosine(p) | TGT | (Cys/C) Cysteine(p) | T |
TTC | TCC | TAC | TGC | C | |||||
TTA | (Leu/L) Leucine(np) | TCA | TAA | Stop( Ochre) * [note 2 ] | TGA | Stop( Opal) * [note 2 ] | A | ||
TTG ⇒ | TCG | TAG | Stop( Amber) * [note 2 ] | TGG | (Trp/W) Tryptophan(np) | G | |||
C | CTT | CCT | (Pro/P) Proline(np) | CAT | (His/H) Histidine(b) | CGT | (Arg/R) Arginine(b) | T | |
CTC | CCC | CAC | CGC | C | |||||
CTA | CCA | CAA | (Gln/Q) Glutamine(p) | CGA | A | ||||
CTG | CCG | CAG | CGG | G | |||||
A | ATT | (Ile/I) Isoleucine(np) | ACT | (Thr/T) Threonine(p) | AAT | (Asn/N) Asparagine(p) | AGT | (Ser/S) Serine(p) | T |
ATC | ACC | AAC | AGC | C | |||||
ATA | ACA | AAA | (Lys/K) Lysine(b) | AGA | (Arg/R) Arginine(b) | A | |||
ATG ⇒ | (Met/M) Methionine(np) | ACG | AAG | AGG | G | ||||
G | GTT | (Val/V) Valine(np) | GCT | (Ala/A) Alanine(np) | GAT | (Asp/D) Aspartic acid(a) | GGT | (Gly/G) Glycine(np) | T |
GTC | GCC | GAC | GGC | C | |||||
GTA | GCA | GAA | (Glu/E) Glutamic acid(a) | GGA | A | ||||
GTG ⇒ | GCG | GAG | GGG | G |